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85721be69b
* Modified search/text_search.cpp * Added tests * Added a few test cases * Added a few more test cases and documentation * Minor fix * Minor fixes * Minor fixes * Minor output fixes * Minor output fixes * Minor readability fixes * clang-format and clang-tidy fixes fora01765a6
* Restored original settings * clang-format and clang-tidy fixes for6a8f3a4e
Co-authored-by: github-actions <${GITHUB_ACTOR}@users.noreply.github.com> Co-authored-by: David Leal <halfpacho@gmail.com>
261 lines
9.5 KiB
C++
261 lines
9.5 KiB
C++
/**
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* @file
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* @brief [Geometric
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* Distribution](https://en.wikipedia.org/wiki/Geometric_distribution)
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*
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* @details
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* The geometric distribution models the experiment of doing Bernoulli trials
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* until a sucess was observed. There are two formulations of the geometric
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* distribution: 1) The probability distribution of the number X of Bernoulli
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* trials needed to get one success, supported on the set { 1, 2, 3, ... } 2)
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* The probability distribution of the number Y = X − 1 of failures before the
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* first success, supported on the set { 0, 1, 2, 3, ... } Here, the first one
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* is implemented.
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*
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* Common variables used:
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* p - The success probability
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* k - The number of tries
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*
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* @author [Domenic Zingsheim](https://github.com/DerAndereDomenic)
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*/
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#include <cassert> /// for assert
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#include <cmath> /// for math functions
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#include <cstdint> /// for fixed size data types
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#include <ctime> /// for time to initialize rng
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#include <iostream> /// for std::cout
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#include <limits> /// for std::numeric_limits
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#include <random> /// for random numbers
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#include <vector> /// for std::vector
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/**
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* @namespace probability
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* @brief Probability algorithms
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*/
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namespace probability {
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/**
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* @namespace geometric_dist
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* @brief Functions for the [Geometric
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* Distribution](https://en.wikipedia.org/wiki/Geometric_distribution) algorithm
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* implementation
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*/
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namespace geometric_dist {
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/**
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* @brief Returns a random number between [0,1]
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* @returns A uniformly distributed random number between 0 (included) and 1
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* (included)
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*/
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float generate_uniform() {
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return static_cast<float>(rand()) / static_cast<float>(RAND_MAX);
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}
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/**
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* @brief A class to model the geometric distribution
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*/
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class geometric_distribution {
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private:
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float p; ///< The succes probability p
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public:
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/**
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* @brief Constructor for the geometric distribution
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* @param p The success probability
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*/
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explicit geometric_distribution(const float& p) : p(p) {}
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/**
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* @brief The expected value of a geometrically distributed random variable
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* X
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* @returns E[X] = 1/p
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*/
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float expected_value() const { return 1.0f / p; }
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/**
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* @brief The variance of a geometrically distributed random variable X
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* @returns V[X] = (1 - p) / p^2
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*/
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float variance() const { return (1.0f - p) / (p * p); }
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/**
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* @brief The standard deviation of a geometrically distributed random
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* variable X
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* @returns \sigma = \sqrt{V[X]}
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*/
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float standard_deviation() const { return std::sqrt(variance()); }
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/**
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* @brief The probability density function
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* @details As we use the first definition of the geometric series (1),
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* we are doing k - 1 failed trials and the k-th trial is a success.
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* @param k The number of trials to observe the first success in [1,\infty)
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* @returns A number between [0,1] according to p * (1-p)^{k-1}
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*/
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float probability_density(const uint32_t& k) const {
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return std::pow((1.0f - p), static_cast<float>(k - 1)) * p;
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}
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/**
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* @brief The cumulative distribution function
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* @details The sum of all probabilities up to (and including) k trials.
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* Basically CDF(k) = P(x <= k)
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* @param k The number of trials in [1,\infty)
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* @returns The probability to have success within k trials
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*/
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float cumulative_distribution(const uint32_t& k) const {
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return 1.0f - std::pow((1.0f - p), static_cast<float>(k));
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}
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/**
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* @brief The inverse cumulative distribution function
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* @details This functions answers the question: Up to how many trials are
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* needed to have success with a probability of cdf? The exact floating
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* point value is reported.
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* @param cdf The probability in [0,1]
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* @returns The number of (exact) trials.
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*/
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float inverse_cumulative_distribution(const float& cdf) const {
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return std::log(1.0f - cdf) / std::log(1.0f - p);
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}
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/**
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* @brief Generates a (discrete) sample according to the geometrical
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* distribution
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* @returns A geometrically distributed number in [1,\infty)
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*/
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uint32_t draw_sample() const {
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float uniform_sample = generate_uniform();
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return static_cast<uint32_t>(
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inverse_cumulative_distribution(uniform_sample)) +
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1;
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}
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/**
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* @brief This function computes the probability to have success in a given
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* range of tries
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* @details Computes P(min_tries <= x <= max_tries).
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* Can be used to calculate P(x >= min_tries) by not passing a second
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* argument. Can be used to calculate P(x <= max_tries) by passing 1 as the
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* first argument
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* @param min_tries The minimum number of tries in [1,\infty) (inclusive)
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* @param max_tries The maximum number of tries in [min_tries, \infty)
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* (inclusive)
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* @returns The probability of having success within a range of tries
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* [min_tries, max_tries]
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*/
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float range_tries(const uint32_t& min_tries = 1,
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const uint32_t& max_tries =
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std::numeric_limits<uint32_t>::max()) const {
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float cdf_lower = cumulative_distribution(min_tries - 1);
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float cdf_upper = max_tries == std::numeric_limits<uint32_t>::max()
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? 1.0f
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: cumulative_distribution(max_tries);
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return cdf_upper - cdf_lower;
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}
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};
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} // namespace geometric_dist
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} // namespace probability
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/**
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* @brief Tests the sampling method of the geometric distribution
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* @details Draws 1000000 random samples and estimates mean and variance
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* These should be close to the expected value and variance of the given
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* distribution to pass.
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* @param dist The distribution to test
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*/
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void sample_test(
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const probability::geometric_dist::geometric_distribution& dist) {
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uint32_t n_tries = 1000000;
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std::vector<float> tries;
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tries.resize(n_tries);
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float mean = 0.0f;
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for (uint32_t i = 0; i < n_tries; ++i) {
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tries[i] = static_cast<float>(dist.draw_sample());
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mean += tries[i];
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}
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mean /= static_cast<float>(n_tries);
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float var = 0.0f;
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for (uint32_t i = 0; i < n_tries; ++i) {
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var += (tries[i] - mean) * (tries[i] - mean);
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}
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// Unbiased estimate of variance
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var /= static_cast<float>(n_tries - 1);
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std::cout << "This value should be near " << dist.expected_value() << ": "
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<< mean << std::endl;
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std::cout << "This value should be near " << dist.variance() << ": " << var
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<< std::endl;
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}
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/**
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* @brief Self-test implementations
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* @returns void
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*/
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static void test() {
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probability::geometric_dist::geometric_distribution dist(0.3);
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const float threshold = 1e-3f;
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std::cout << "Starting tests for p = 0.3..." << std::endl;
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assert(std::abs(dist.expected_value() - 3.33333333f) < threshold);
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assert(std::abs(dist.variance() - 7.77777777f) < threshold);
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assert(std::abs(dist.standard_deviation() - 2.788866755) < threshold);
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assert(std::abs(dist.probability_density(5) - 0.07203) < threshold);
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assert(std::abs(dist.cumulative_distribution(6) - 0.882351) < threshold);
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assert(std::abs(dist.inverse_cumulative_distribution(
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dist.cumulative_distribution(8)) -
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8) < threshold);
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assert(std::abs(dist.range_tries() - 1.0f) < threshold);
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assert(std::abs(dist.range_tries(3) - 0.49f) < threshold);
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assert(std::abs(dist.range_tries(5, 11) - 0.2203267f) < threshold);
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std::cout << "All tests passed" << std::endl;
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sample_test(dist);
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dist = probability::geometric_dist::geometric_distribution(0.5f);
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std::cout << "Starting tests for p = 0.5..." << std::endl;
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assert(std::abs(dist.expected_value() - 2.0f) < threshold);
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assert(std::abs(dist.variance() - 2.0f) < threshold);
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assert(std::abs(dist.standard_deviation() - 1.4142135f) < threshold);
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assert(std::abs(dist.probability_density(5) - 0.03125) < threshold);
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assert(std::abs(dist.cumulative_distribution(6) - 0.984375) < threshold);
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assert(std::abs(dist.inverse_cumulative_distribution(
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dist.cumulative_distribution(8)) -
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8) < threshold);
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assert(std::abs(dist.range_tries() - 1.0f) < threshold);
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assert(std::abs(dist.range_tries(3) - 0.25f) < threshold);
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assert(std::abs(dist.range_tries(5, 11) - 0.062011f) < threshold);
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std::cout << "All tests passed" << std::endl;
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sample_test(dist);
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dist = probability::geometric_dist::geometric_distribution(0.8f);
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std::cout << "Starting tests for p = 0.8..." << std::endl;
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assert(std::abs(dist.expected_value() - 1.25f) < threshold);
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assert(std::abs(dist.variance() - 0.3125f) < threshold);
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assert(std::abs(dist.standard_deviation() - 0.559016f) < threshold);
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assert(std::abs(dist.probability_density(5) - 0.00128) < threshold);
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assert(std::abs(dist.cumulative_distribution(6) - 0.999936) < threshold);
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assert(std::abs(dist.inverse_cumulative_distribution(
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dist.cumulative_distribution(8)) -
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8) < threshold);
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assert(std::abs(dist.range_tries() - 1.0f) < threshold);
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assert(std::abs(dist.range_tries(3) - 0.04f) < threshold);
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assert(std::abs(dist.range_tries(5, 11) - 0.00159997f) < threshold);
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std::cout << "All tests have successfully passed!" << std::endl;
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sample_test(dist);
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}
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/**
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* @brief Main function
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* @return 0 on exit
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*/
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int main() {
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srand(time(nullptr));
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test(); // run self-test implementations
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return 0;
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}
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